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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8436985_8438967_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8436985 - 8438967

Intron Length:
1983

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAGTTAA

5'SS Class:
strong_major

3'SS Sequence:
GCCTCTCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTCAT

U12 Branch Point Sequence:
CACCTCATACCT

Flanking Amino Acid:
VPEAVEKIDIGGVALLRAAA

Intron Amino Acid Position:
256

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.8
0.89
0.9
80.6
29.6

Major BPS
73.5
0.58
1
73.6
32.5

Major PPT
78.8
0.65
0.8
72.4
32.3

Minor 5ss
40
-1.1
2.8
49.9
46.4

Minor BPS
45.1
-0.2
1.9
58.78
44.2

Associated Gene:

Gene:
ATIC

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8430877 - 8451892
21016