Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8439404_8440301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8439404 - 8440301

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCTGCTCTAACG

Flanking Amino Acid:

YTMRPKLPLTVVNGSPGFIN

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

75.1

0.57

68.5

42.1

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

49.3

-0.1

1.9

55.09

46.5

Associated Gene:

Gene:

ATIC

Ensembl Gene ID:

ENSAPLG00000014306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014981

8430877 - 8451892

21016