About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8442959_8444126_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
8442959 - 8444126
Intron Length:
1168

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTTGTATT
5'SS Class:
major
3'SS Sequence:
TGTTGGCTTTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAC
U12 Branch Point Sequence:
AGAGTTTTAACC
Flanking Amino Acid:
KKNGGYCVLQMDPAYEPDDT
Intron Amino Acid Position:
496

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.5
0.7
1.1
84.7
32.4
Major BPS
89.7
0.98
0.7
89.9
20
Major PPT
73.8
0.54
0.9
70.2
41.3
Minor 5ss
44.1
-0.6
2.5
60.5
43.9
Minor BPS
59
0.26
1.4
61.66
37.7

Associated Gene:

Gene:
ATIC
Ensembl Gene ID:
ENSAPLG00000014306
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000014981
8430877 - 8451892
21016