Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8450913_8451279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8450913 - 8451279

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCGATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCGAT

U12 Branch Point Sequence:

CACTCCCGATCT

Flanking Amino Acid:

DQYVTGTIGEDEDLAKWQAM

Intron Amino Acid Position:

631

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

56.1

0.15

1.3

54.3

42.9

Major PPT

0.52

0.9

68.5

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

45.5

-0.2

62.79

46.6

Associated Gene:

Gene:

ATIC

Ensembl Gene ID:

ENSAPLG00000014306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014981

8430877 - 8451892

21016