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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8503276_8505073_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8503276 - 8505073

Intron Length:
1798

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTACGTAAC

5'SS Class:
major

3'SS Sequence:
CTCCTGCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
GGCCCCTCACCT

Flanking Amino Acid:
GRGRISCTIANRCHEGGQSY

Intron Amino Acid Position:
142

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.2
0.43
1.1
66.6
39.2

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
75.6
0.58
0.8
68.9
31.6

Minor 5ss
37.2
-1.5
3
50.6
40.1

Minor BPS
48.1
-0
1.9
63.55
45.9

Associated Gene:

Gene:
FN1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8456465 - 8507187
50723