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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8651468_8651709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8651468 - 8651709

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGACAC

U12 Branch Point Sequence:

CTGGCCAGACGG

Flanking Amino Acid:

AKTLLPEMEKRLLEVMGVPS

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

42.9

-0.4

1.2

44.4

38.7

Major PPT

82.1

0.72

0.8

76.6

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

35.2

-1.2

2.1

36.3

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013109

8649751 - 8651800

2050