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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8672238_8674893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8672238 - 8674893

Intron Length:

2656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTGCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTTGCTTCACA

Flanking Amino Acid:

EVAELEANLPCTCKVNFPDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

85.2

0.79

0.8

32.1

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

65.3

0.48

2.2

83.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025673

8672186 - 8678176

5991

ENSAPLT00000004457

8672186 - 8705577

33392