Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8741502_8741537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8741502 - 8741537

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGATTTGC

5'SS Class:

major

3'SS Sequence:

TGTATTTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTGCAATCAAAC

Flanking Amino Acid:

QQCLTSLHCIDDLRSHFQEY

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.1

56.8

36.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.3

0.62

0.8

73.2

Minor 5ss

37.7

-1.4

2.9

49.6

41.2

Minor BPS

43.6

-0.5

56.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032806

8739418 - 8747575

8158