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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8864350_8868251_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8864350 - 8868251

Intron Length:

3902

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCATGAAGC

5'SS Class:

major

3'SS Sequence:

ACGGCAGCGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAG

U12 Branch Point Sequence:

CGGGCTTCCAGG

Flanking Amino Acid:

FMAVGKTRGEEEGQALGEGG

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.2

67.1

40.9

Major BPS

46.4

-0.2

1.7

61.8

44.5

Major PPT

40.3

-0.5

1.6

32.1

35.9

Minor 5ss

31.3

-2.1

3.9

43.2

38.2

Minor BPS

35.1

-1.3

41.8

Associated Gene:

Gene:

RAB17

Ensembl Gene ID:

ENSAPLG00000004880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005039

8863149 - 8868296

5148