Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8868571_8869247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8868571 - 8869247

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TCTTTCATCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTTCTTTCATC

Flanking Amino Acid:

RKFHSPLDISSPDDSFDRNS

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

36.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.1

0.72

0.8

76.8

30.4

Minor 5ss

33.9

-1.8

3.4

48.8

Minor BPS

64.6

0.44

1.7

73.34

38.7

Associated Gene:

Gene:

MLPH

Ensembl Gene ID:

ENSAPLG00000005150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038745

8868425 - 8886302

17878

ENSAPLT00000021982

8868425 - 8886302

17878

ENSAPLT00000005352

8868425 - 8886302

17878