Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8874755_8878847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8874755 - 8878847

Intron Length:

4093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGC

5'SS Class:

major

3'SS Sequence:

TCCTTTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCTAC

U12 Branch Point Sequence:

CTGTCCTCTACT

Flanking Amino Acid:

QENISHSGNQIHELNKRMSA

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

45.6

-0.2

1.3

41.7

38.6

Major PPT

80.5

0.69

0.7

73.5

31.6

Minor 5ss

38.8

-1.3

3.1

52.2

44.6

Minor BPS

58.4

0.35

76.35

Associated Gene:

Gene:

MLPH

Ensembl Gene ID:

ENSAPLG00000005150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021982

8868425 - 8886302

17878

ENSAPLT00000005352

8868425 - 8886302

17878