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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8882134_8883821_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8882134 - 8883821

Intron Length:

1688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GAGGAGAAGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

ACTGCTTCATCC

Flanking Amino Acid:

PGQRDNSAFLGAMWWGLTCE

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

40.3

-0.5

1.1

20.2

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

46.8

-0.2

1.9

56.34

42.7

Associated Gene:

Gene:

MLPH

Ensembl Gene ID:

ENSAPLG00000005150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035667

8868425 - 8886302

17878