Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_8883914_8884042_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8883914 - 8884042

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGTGAGG

5'SS Class:

weak_major

3'SS Sequence:

ACGAGCACGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GGTCCCTGGAGT

Flanking Amino Acid:

WGEKICLGSWGPGSRGLEVP

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.1

44.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

-0.5

1.6

36.8

Minor 5ss

24.5

-2.9

3.1

21.6

37.4

Minor BPS

49.2

0.02

1.8

67.52

42.7

Associated Gene:

Gene:

MLPH

Ensembl Gene ID:

ENSAPLG00000005150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025956

8883822 - 8886302

2481