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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8914716_8917529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8914716 - 8917529

Intron Length:

2814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTACTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTGTGCTCTACT

Flanking Amino Acid:

GGMIVQEPPSVQVTKRDIIF

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

76.5

0.6

0.9

70.3

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

46.7

-0.1

2.3

68.02

48.4

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000034921

8903831 - 9126576

222746

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099