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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8914716_8919401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8914716 - 8919401

Intron Length:

4686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

GAATTTATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTGTGAATT

Flanking Amino Acid:

GGMIVQEPPSESKKDILFLI

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

100

1.24

0.5

100

Major PPT

68.7

0.42

59.7

45.5

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

48.8

-0

2.1

69.18

42.2

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099