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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8928075_8928637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8928075 - 8928637

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TCTTCCTCCACA

Flanking Amino Acid:

LCPGTPDVTRECDLDVILGF

Intron Amino Acid Position:

1836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

75.3

40.8

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

85.3

0.79

0.7

82.1

29.1

Minor 5ss

39.7

-1.2

2.8

49.5

46.5

Minor BPS

61.5

0.36

75.44

42.2

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000034921

8903831 - 9126576

222746