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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8929453_8929811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8929453 - 8929811

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATTTT

5'SS Class:

major

3'SS Sequence:

TGCCCCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

CGTCCCATCACA

Flanking Amino Acid:

SAASADLHEQGVNALIFVGL

Intron Amino Acid Position:

1978

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

81.2

33.8

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

77.1

0.61

0.8

73.1

31.7

Minor 5ss

44.1

-0.6

3.3

66.4

45.1

Minor BPS

48.5

-0.1

2.1

62.7

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034921

8903831 - 9126576

222746

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099