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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8933198_8933319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8933198 - 8933319

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGAGC

5'SS Class:

major

3'SS Sequence:

CTCTCTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGCCCCTTACCT

Flanking Amino Acid:

KGSRGFPGEKGELGEMGLDG

Intron Amino Acid Position:

2109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

80.6

0.69

0.7

76.1

25.9

Minor 5ss

31.5

-2.1

3.3

43.1

44.1

Minor BPS

64.9

0.55

1.7

78.23

43.7

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034921

8903831 - 9126576

222746

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099