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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8937821_8937921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8937821 - 8937921

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGC

5'SS Class:

major

3'SS Sequence:

TTTCCCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAG

U12 Branch Point Sequence:

TTTTCCCCACCC

Flanking Amino Acid:

RGFIGYPGPKGGPGDRGSAG

Intron Amino Acid Position:

2328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

42.1

Major BPS

55.2

0.13

1.6

60.7

45.9

Major PPT

74.3

0.55

0.8

66.5

34.6

Minor 5ss

-1.6

3.5

50.3

46.3

Minor BPS

0.07

2.2

75.8

40.5

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099

ENSAPLT00000034921

8903831 - 9126576

222746

ENSAPLT00000033606

8903831 - 8952929

49099