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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8940018_8940641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8940018 - 8940641

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGAGCC

5'SS Class:

major

3'SS Sequence:

TGCATCTAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTGCATCTAACC

Flanking Amino Acid:

QDAALERALEINNTAVGHAI

Intron Amino Acid Position:

2562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

60.1

40.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

0.29

1.1

55.6

43.7

Minor 5ss

26.7

-2.7

3.3

34.2

41.6

Minor BPS

49.8

-0

1.8

65.66

39.6

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034921

8903831 - 9126576

222746

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099