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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8940742_8941247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8940742 - 8941247

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGCAT

5'SS Class:

major

3'SS Sequence:

ATTTCTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

GTTCCTCCAAGT

Flanking Amino Acid:

RRLLTCHVCLDVCEPDPICG

Intron Amino Acid Position:

2595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

77.3

0.62

0.8

70.5

35.6

Minor 5ss

31.3

-2.1

3.5

38.6

46.6

Minor BPS

45.4

-0.2

2.1

67.4

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099

ENSAPLT00000005838

8903831 - 8952929

49099

ENSAPLT00000036619

8903831 - 8952929

49099

ENSAPLT00000034921

8903831 - 9126576

222746