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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8944951_9126340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8944951 - 9126340

Intron Length:

181390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGACAGA

5'SS Class:

major

3'SS Sequence:

GGAGATGCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

AAAGACTAAATA

Flanking Amino Acid:

GTERVIGGLRGISVHHAKPR

Intron Amino Acid Position:

3013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.1

58.3

42.5

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

49.1

-0

1.1

36.7

44.6

Minor 5ss

31.3

-2.1

3.2

39.5

46.1

Minor BPS

45.9

-0.3

1.8

52.75

39.3

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034921

8903831 - 9126576

222746