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Intron Name: Anas_platyrhynchos_platyrhynchos_7_8948892_8949003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8948892 - 8949003

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CGTTTAAAAACC

Flanking Amino Acid:

AECISKCLKPSAAEKAKQPP

Intron Amino Acid Position:

3125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

88.8

0.87

0.7

81.3

30.7

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

43.7

-0.5

2.1

56.68

41.6

Associated Gene:

Gene:

COL6A3

Ensembl Gene ID:

ENSAPLG00000005511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036619

8903831 - 8952929

49099

ENSAPLT00000033606

8903831 - 8952929

49099

ENSAPLT00000026823

8903831 - 8952929

49099

ENSAPLT00000040566

8903831 - 8952929

49099