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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9036601_9037622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9036601 - 9037622

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

CTTCTGTTACGT

Flanking Amino Acid:

STRMVMPKKPGALEASFNRF

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

85.4

0.8

0.7

81.6

30.4

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

42.7

-0.4

2.4

63.99

46.6

Associated Gene:

Gene:

COPS8

Ensembl Gene ID:

ENSAPLG00000016947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024937

9035351 - 9042572

7222