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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9038242_9039131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9038242 - 9039131

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTTAA

5'SS Class:

major

3'SS Sequence:

TATCTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTACATTTATCT

Flanking Amino Acid:

TIQPIMEALRDATRRRAFGL

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

71.3

37.1

Major BPS

76.3

0.65

67.3

39.3

Major PPT

83.1

0.74

0.7

81.6

Minor 5ss

-0.7

2.9

58.2

46.4

Minor BPS

0.24

1.8

75.49

40.8

Associated Gene:

Gene:

COPS8

Ensembl Gene ID:

ENSAPLG00000016947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024937

9035351 - 9042572

7222