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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9156359_9160413_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9156359 - 9160413

Intron Length:
4055

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATGGCG

5'SS Class:
major

3'SS Sequence:
GTTTGTTCCGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGGAT

U12 Branch Point Sequence:
TTTCTTTGGATC

Flanking Amino Acid:
LTRCQRRVAEVTRTLKRANM

Intron Amino Acid Position:
116

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
63.3
41.2

Major BPS
71.4
0.53
1.4
71.4
45.1

Major PPT
74.6
0.55
0.9
69.8
36.6

Minor 5ss
29.6
-2.3
3.4
39
46.3

Minor BPS
53.5
0.09
1.4
66.87
32.5

Associated Gene:

Gene:
ACKR3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9155237 - 9160758
5522