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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9230990_9253472_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9230990 - 9253472

Intron Length:

22483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCAGA

5'SS Class:

major

3'SS Sequence:

GTTTCTCATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGATTTTAATT

Flanking Amino Acid:

DQIGQCFIECRHIIGRFPDY

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

65.3

42.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

78.2

35.3

Minor 5ss

33.8

-1.8

2.9

40.4

45.5

Minor BPS

63.5

0.5

1.3

72.55

Associated Gene:

Gene:

IQCA1

Ensembl Gene ID:

ENSAPLG00000011968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012456

9211872 - 9302621

90750