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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9271636_9271680_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9271636 - 9271680

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGGAGGAA

5'SS Class:

weak_major

3'SS Sequence:

ACAATAGTAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

CTTACAATAGTA

Flanking Amino Acid:

ELIKEEKREEDTNNVHCLCI

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.1

52.4

34.2

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

43.4

-0.3

1.7

39.9

42.1

Minor 5ss

22.8

-3.1

3.6

26.7

38.8

Minor BPS

-0.4

58.43

41.1

Associated Gene:

Gene:

IQCA1

Ensembl Gene ID:

ENSAPLG00000011968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012456

9211872 - 9302621

90750