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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9283693_9287015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9283693 - 9287015

Intron Length:

3323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGACTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TGACTTTTTACA

Flanking Amino Acid:

LIALYGILPLGSQTVHEKAP

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

0.5

1.1

76.9

32.8

Major PPT

81.8

0.72

0.9

37.8

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

51.5

0.04

1.6

61.83

38.2

Associated Gene:

Gene:

IQCA1

Ensembl Gene ID:

ENSAPLG00000011968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012456

9211872 - 9302621

90750