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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9298880_9302106_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9298880 - 9302106

Intron Length:

3227

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCGATGAGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGCAT

U12 Branch Point Sequence:

TCTTTGGCATTC

Flanking Amino Acid:

IPRPDYASRFVLWKHIIQQN

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

92.3

24.3

Major BPS

59.9

0.25

1.5

71.4

45.1

Major PPT

59.3

0.21

1.1

54.4

39.3

Minor 5ss

31.5

-2.1

48.3

41.8

Minor BPS

35.1

-1.1

2.5

42.3

Associated Gene:

Gene:

IQCA1

Ensembl Gene ID:

ENSAPLG00000011968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012456

9211872 - 9302621

90750