Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_9324583_9325111_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9324583 - 9325111

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCCCG

5'SS Class:

major

3'SS Sequence:

TGCCCACCACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAGAC

U12 Branch Point Sequence:

TTGCCCACCACT

Flanking Amino Acid:

QKIWPPAFAKVLKSCAAVPE

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.3

48.3

47.8

Major BPS

51.6

0.04

1.1

48.6

36.6

Major PPT

57.2

0.16

0.9

48.9

34.4

Minor 5ss

42.7

-0.8

3.1

57.6

46.6

Minor BPS

46.3

-0.2

2.2

70.96

45.3

Associated Gene:

Gene:

ASB18

Ensembl Gene ID:

ENSAPLG00000027146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006233

9311839 - 9326261

14423

ENSAPLT00000042919

9314837 - 9326261

11425

ENSAPLT00000038381

9316672 - 9326261

9590