Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_9325226_9326150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9325226 - 9326150

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAT

U12 Branch Point Sequence:

AAAAGCTTATTT

Flanking Amino Acid:

AEVVPEEVMQQHRLFYESFF

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

67.4

0.43

1.1

57.4

41.4

Major PPT

84.8

0.78

0.7

79.7

25.8

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

46.5

-0.1

61.34

42.4

Associated Gene:

Gene:

ASB18

Ensembl Gene ID:

ENSAPLG00000027146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006233

9311839 - 9326261

14423

ENSAPLT00000042919

9314837 - 9326261

11425

ENSAPLT00000038381

9316672 - 9326261

9590