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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9389285_9395401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9389285 - 9395401

Intron Length:

6117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CTTTTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTTTGTTATTC

Flanking Amino Acid:

NSHCVDCEAQNPDWASLNLG

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.5

0.8

0.6

81.7

23.3

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

-0.1

2.2

66.16

40.1

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021503

9352387 - 9633936

281550

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261