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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9395493_9397724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9395493 - 9397724

Intron Length:

2232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CAAATCTACGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

GTTTCTTCAAAT

Flanking Amino Acid:

LQSCESSKNKSRMTSQSEAM

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.7

40.1

Major BPS

77.3

0.68

81.5

Major PPT

61.2

0.25

54.6

39.8

Minor 5ss

37.1

-1.5

3.3

49.6

Minor BPS

0.58

1.6

82.62

38.2

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021503

9352387 - 9633936

281550

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261