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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9439763_9475074_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9439763 - 9475074

Intron Length:

35312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCAAACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCCCAAACT

Flanking Amino Acid:

MSSLHISPNSDTGLGDSVCS

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

67.1

0.39

0.9

59.1

35.5

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

0.68

92.91

35.6

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021503

9352387 - 9633936

281550

ENSAPLT00000015849

9352387 - 9700224

347838