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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9475244_9487648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9475244 - 9487648

Intron Length:

12405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTCCTCTTATCA

Flanking Amino Acid:

GVLTYHPSLHDYMQNVHGKE

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

81.4

0.71

0.8

81.4

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

62.8

0.4

1.6

72.17

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261

ENSAPLT00000021503

9352387 - 9633936

281550