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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9524203_9528987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9524203 - 9528987

Intron Length:

4785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTAACGGAGCA

Flanking Amino Acid:

QSKRRSNLFTSRKGSDPDKE

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

0.9

0.6

85.3

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

42.2

-0.5

2.3

62.44

43.1

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021503

9352387 - 9633936

281550

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261