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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9529144_9539921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9529144 - 9539921

Intron Length:

10778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGCT

5'SS Class:

major

3'SS Sequence:

TTAATCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTAACTTTAATC

Flanking Amino Acid:

AQVSAVHISQTSNGGGSLSD

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

40.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.2

0.68

0.9

36.3

Minor 5ss

30.1

-2.3

3.8

47.7

Minor BPS

0.48

1.3

67.58

38.4

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261

ENSAPLT00000021503

9352387 - 9633936

281550