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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9575420_9578057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9575420 - 9578057

Intron Length:

2638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTCCACA

Flanking Amino Acid:

RDEGGPPEAQFAMWVDAVIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.2

0.79

0.7

80.4

31.3

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

49.6

-0

2.1

72.44

39.6

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261