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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9578144_9594756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9578144 - 9594756

Intron Length:

16613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ACTTCTGTAATG

Flanking Amino Acid:

GTYVQEESPEGGRFKKEIVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

73.8

0.54

40.8

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

53.2

-0

2.1

60.82

42.1

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015849

9352387 - 9700224

347838

ENSAPLT00000006100

9352387 - 9602647

250261