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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9594670_9594756_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9594670 - 9594756

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CAAATTGGTAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAATTTTTAATC

Flanking Amino Acid:

GTYVQEESPEESYSFAMWVD

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

49.6

-0

1.2

47.7

43.6

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

66.4

0.49

1.1

66.2

Associated Gene:

Gene:

AGAP1

Ensembl Gene ID:

ENSAPLG00000005893

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021503

9352387 - 9633936

281550