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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9796318_9798598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9796318 - 9798598

Intron Length:

2281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

AGCGCATCATTT

Flanking Amino Acid:

AQGGGKETLKSIHVAIKSKI

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

86.9

22.7

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

64.3

0.32

0.9

54.9

41.4

Minor 5ss

45.5

-0.5

2.8

58.5

40.4

Minor BPS

40.5

-0.6

1.9

52.39

42.6

Associated Gene:

Gene:

TRPM8

Ensembl Gene ID:

ENSAPLG00000014898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015666

9787598 - 9821830

34233