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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9801025_9801510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9801025 - 9801510

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

GGTGTTTTACCT

Flanking Amino Acid:

SNAISFALYKAFSTNEHDRD

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.7

82.9

36.3

Major BPS

68.8

0.47

1.2

63.4

Major PPT

0.88

0.6

84.5

23.3

Minor 5ss

31.6

-2.1

49.7

46.6

Minor BPS

51.8

0.14

1.7

68.36

42.9

Associated Gene:

Gene:

TRPM8

Ensembl Gene ID:

ENSAPLG00000014898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015666

9787598 - 9821830

34233