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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9807050_9807789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9807050 - 9807789

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTACAA

U12 Branch Point Sequence:

GTTACAACAAAC

Flanking Amino Acid:

QQFIAQPGVQNFLSKQWYGE

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.3

31.6

Major BPS

55.8

0.14

1.2

39.8

Major PPT

86.5

0.82

0.7

81.4

23.6

Minor 5ss

38.3

-1.3

49.1

46.6

Minor BPS

42.3

-0.6

56.73

40.4

Associated Gene:

Gene:

TRPM8

Ensembl Gene ID:

ENSAPLG00000014898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015666

9787598 - 9821830

34233