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Intron Name: Anas_platyrhynchos_platyrhynchos_7_9818516_9821779_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9818516 - 9821779

Intron Length:

3264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTCTGCACT

5'SS Class:

weak_major

3'SS Sequence:

TTTTATTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTC

Flanking Amino Acid:

TKASDSSEEYLSDLKGLLKE

Intron Amino Acid Position:

1070

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.4

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.3

0.66

83.9

31.1

Minor 5ss

-0.4

2.6

63.7

40.5

Minor BPS

67.3

0.52

1.5

77.16

33.3

Associated Gene:

Gene:

TRPM8

Ensembl Gene ID:

ENSAPLG00000014898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015666

9787598 - 9821830

34233