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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10359031_10360725_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10359031 - 10360725

Intron Length:
1695

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTATGGATG

5'SS Class:
major

3'SS Sequence:
CTCCCACTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAC

U12 Branch Point Sequence:
TCCATACTAACT

Flanking Amino Acid:
DVEQYKQSVLEYCNRVQEKR

Intron Amino Acid Position:
375

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.3
0.31
1.1
59.8
44.7

Major BPS
76.8
0.67
0.9
75.9
25

Major PPT
71.2
0.48
0.8
62.1
33.6

Minor 5ss
43.2
-0.7
3.1
53.3
44.9

Minor BPS
47.3
-0.1
2
66.06
44.3

Associated Gene:

Gene:
NUF2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10358104 - 10370563
12460