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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10389566_10394849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10389566 - 10394849

Intron Length:

5284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

ACGGCCTTACTG

Flanking Amino Acid:

YILCTMSIRQNIQKMLGLAP

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.5

33.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

88.7

0.87

0.7

Minor 5ss

30.6

-2.2

2.5

34.1

41.4

Minor BPS

48.4

-0.2

1.8

48.7

45.7

Associated Gene:

Gene:

TMCO1

Ensembl Gene ID:

ENSAPLG00000008558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019610

10389467 - 10398584

9118

ENSAPLT00000008894

10389467 - 10406109

16643