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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10411893_10420004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10411893 - 10420004

Intron Length:

8112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGCCCA

5'SS Class:

major

3'SS Sequence:

GTTCTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGCCCCTGACTT

Flanking Amino Acid:

GVSGGTASGKSSVCSKIVQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

58.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

83.7

0.76

0.8

76.4

37.6

Minor 5ss

31.6

-2.1

3.1

39.7

45.8

Minor BPS

49.6

0.05

1.8

67.06

43.7

Associated Gene:

Gene:

UCK2

Ensembl Gene ID:

ENSAPLG00000018550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023742

10411794 - 10428523

16730

ENSAPLT00000044768

10411794 - 10428523

16730