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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10421149_10421669_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10421149 - 10421669

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCAACAG

5'SS Class:

weak_major

3'SS Sequence:

TTCCCTCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CACATTGTGACT

Flanking Amino Acid:

IPVYDFVSHSRKEETVTVYP

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.4

46.9

43.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

70.7

0.47

0.9

65.6

36.1

Minor 5ss

-2.9

30.3

42.8

Minor BPS

43.4

-0.4

55.1

41.6

Associated Gene:

Gene:

UCK2

Ensembl Gene ID:

ENSAPLG00000018550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020198

10419771 - 10428523

8753

ENSAPLT00000044768

10411794 - 10428523

16730

ENSAPLT00000023742

10411794 - 10428523

16730