Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_10477617_10477813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10477617 - 10477813

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

GATCTTGTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TATTCTTTTACT

Flanking Amino Acid:

KESAKSQFNQEVMDMICRPD

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

64.5

0.33

63.1

42.6

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

75.1

0.87

1.5

89.02

35.4

Associated Gene:

Gene:

DARS2

Ensembl Gene ID:

ENSAPLG00000009344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009746

10464914 - 10482324

17411